Upload ESM2.yml
Browse filesESM2 embedding extraction conda environment
ESM2.yml
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name: ESM2
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channels:
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- defaults
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dependencies:
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- _libgcc_mutex=0.1=main
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- _openmp_mutex=5.1=1_gnu
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- bzip2=1.0.8=h5eee18b_6
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- ca-certificates=2025.2.25=h06a4308_0
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- expat=2.7.1=h6a678d5_0
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- ld_impl_linux-64=2.40=h12ee557_0
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- libffi=3.4.4=h6a678d5_1
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- libgcc-ng=11.2.0=h1234567_1
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- libgomp=11.2.0=h1234567_1
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- libstdcxx-ng=11.2.0=h1234567_1
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- libxcb=1.17.0=h9b100fa_0
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- ncurses=6.5=h7934f7d_0
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- openssl=3.0.17=h5eee18b_0
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- pip=25.1=pyhc872135_2
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- pthread-stubs=0.3=h0ce48e5_1
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- python=3.9.23=he99959a_0
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- readline=8.2=h5eee18b_0
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- setuptools=78.1.1=py39h06a4308_0
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- sqlite=3.50.2=hb25bd0a_1
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- tk=8.6.14=h993c535_1
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- tzdata=2025b=h04d1e81_0
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- wheel=0.45.1=py39h06a4308_0
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- xorg-libx11=1.8.12=h9b100fa_1
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- xorg-libxau=1.0.12=h9b100fa_0
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- xorg-libxdmcp=1.1.5=h9b100fa_0
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- xorg-xorgproto=2024.1=h5eee18b_1
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- xz=5.6.4=h5eee18b_1
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- zlib=1.2.13=h5eee18b_1
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- pip:
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- aiohappyeyeballs==2.6.1
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- aiohttp==3.12.15
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- aiosignal==1.4.0
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- async-timeout==5.0.1
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- attrs==25.3.0
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- biotite==0.40.0
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- certifi==2025.8.3
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- charset-normalizer==3.4.2
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- fair-esm==2.0.1
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- filelock==3.18.0
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- frozenlist==1.7.0
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- fsspec==2025.7.0
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- idna==3.10
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- jinja2==3.1.6
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- markupsafe==3.0.2
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- mpmath==1.3.0
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- msgpack==1.1.1
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- multidict==6.6.3
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- networkx==3.2.1
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- numpy==1.26.4
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- nvidia-cublas-cu12==12.6.4.1
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- nvidia-cuda-cupti-cu12==12.6.80
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- nvidia-cuda-nvrtc-cu12==12.6.77
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- nvidia-cuda-runtime-cu12==12.6.77
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- nvidia-cudnn-cu12==9.5.1.17
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- nvidia-cufft-cu12==11.3.0.4
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- nvidia-cufile-cu12==1.11.1.6
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- nvidia-curand-cu12==10.3.7.77
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- nvidia-cusolver-cu12==11.7.1.2
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- nvidia-cusparse-cu12==12.5.4.2
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- nvidia-cusparselt-cu12==0.6.3
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- nvidia-nccl-cu12==2.26.2
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- nvidia-nvjitlink-cu12==12.6.85
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- nvidia-nvtx-cu12==12.6.77
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- propcache==0.3.2
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- psutil==7.0.0
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- pyparsing==3.2.3
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- requests==2.32.4
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- scipy==1.13.1
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- sympy==1.14.0
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- torch==2.7.1
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- torch-geometric==2.6.1
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- tqdm==4.67.1
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- triton==3.3.1
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- typing-extensions==4.14.1
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- urllib3==2.5.0
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- yarl==1.20.1
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prefix: /storage/work/hbp5181/.conda/envs/ESM2
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