sample_id
stringlengths
23
23
population
stringclasses
7 values
region
stringclasses
5 values
is_SSA
bool
2 classes
is_reference_panel
bool
2 classes
sex
stringclasses
2 values
age
int64
18
90
bmi
float64
14
47.1
ses
stringclasses
3 values
prs_category
stringclasses
3 values
prs_standardized
float64
-2.99
2.55
high_risk_germline
bool
2 classes
stage_at_diagnosis
stringclasses
4 values
grade
int64
1
3
tumour_size_cm
float64
0.2
13.8
treatment_regimen
stringclasses
5 values
tumor_subtype
stringclasses
5 values
er_status
stringclasses
2 values
pr_status
stringclasses
2 values
her2_status
stringclasses
2 values
nlr_category
stringclasses
3 values
triple_negative
bool
2 classes
os_time_years
float64
0
9.99
os_event
bool
2 classes
INTEGRATED_SAMPLE_00001
SSA_West
West
true
false
Female
53
25.2
High
Low
-0.192
false
III
3
7.33
Endocrine_only
Luminal_A
Positive
Positive
Negative
Low
false
6.208
false
INTEGRATED_SAMPLE_00002
SSA_West
West
true
false
Female
39
24.2
Low
Average
-0.403
false
IV
3
7.46
Palliative_only
Basal_like
Negative
Negative
Negative
Intermediate
true
2.356
false
INTEGRATED_SAMPLE_00003
SSA_West
West
true
false
Female
58
29.7
Low
High
-0.283
false
III
3
4.68
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
Intermediate
true
0.056
true
INTEGRATED_SAMPLE_00004
SSA_West
West
true
false
Female
60
28.8
Middle
Average
0.36
false
II
2
1.43
Chemo_only
Luminal_A
Positive
Positive
Positive
Intermediate
false
5.918
true
INTEGRATED_SAMPLE_00005
SSA_West
West
true
false
Female
29
20.5
Middle
Average
-0.925
false
II
2
2.32
Chemo_only
HER2_enriched
Positive
Positive
Positive
Intermediate
false
2.987
true
INTEGRATED_SAMPLE_00006
SSA_West
West
true
false
Female
36
33.1
Low
Average
0.458
false
I
3
2.01
Endocrine_only
HER2_enriched
Positive
Positive
Positive
Intermediate
false
4.679
true
INTEGRATED_SAMPLE_00007
SSA_West
West
true
false
Female
51
27
Middle
Average
0.19
false
IV
3
11.17
Endocrine_only
Basal_like
Negative
Negative
Negative
Low
true
0.09
true
INTEGRATED_SAMPLE_00008
SSA_West
West
true
false
Female
47
21.9
Low
High
0.759
false
II
2
4.73
Endocrine_only
Basal_like
Negative
Negative
Negative
Intermediate
true
0.268
true
INTEGRATED_SAMPLE_00009
SSA_West
West
true
false
Female
50
33.4
Middle
High
-0.179
false
IV
3
8.61
Chemo_only
Basal_like
Negative
Negative
Negative
Low
true
0.943
true
INTEGRATED_SAMPLE_00010
SSA_West
West
true
false
Female
41
30.6
Middle
Low
-0.779
false
IV
2
6.65
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
High
true
1.805
true
INTEGRATED_SAMPLE_00011
SSA_West
West
true
false
Female
60
21.2
Low
Low
-0.171
false
I
2
2.21
Chemo_only
Basal_like
Negative
Negative
Negative
Low
true
3.984
false
INTEGRATED_SAMPLE_00012
SSA_West
West
true
false
Female
59
36.4
High
Low
-0.503
false
III
3
7.14
Endocrine_only
Basal_like
Negative
Negative
Negative
High
true
0.343
true
INTEGRATED_SAMPLE_00013
SSA_West
West
true
false
Female
51
30.8
High
Average
1.488
false
II
2
1.85
Chemo_only
HER2_enriched
Positive
Positive
Positive
High
false
0.934
true
INTEGRATED_SAMPLE_00014
SSA_West
West
true
false
Female
62
27.4
Low
High
1.115
true
III
3
5.62
Chemo_only
Luminal_A
Positive
Positive
Negative
Low
false
0.74
true
INTEGRATED_SAMPLE_00015
SSA_West
West
true
false
Female
55
35.5
Low
Average
0.615
false
IV
3
8.82
Surgery_only
Luminal_A
Positive
Positive
Negative
High
false
0.847
false
INTEGRATED_SAMPLE_00016
SSA_West
West
true
false
Female
41
28.3
Middle
Average
-0.32
false
IV
2
9.75
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
Low
true
0.472
true
INTEGRATED_SAMPLE_00017
SSA_West
West
true
false
Female
54
27.4
Low
Average
0.406
false
III
2
7.91
Chemo_plus_targeted
Luminal_B
Positive
Positive
Negative
Low
false
0.228
true
INTEGRATED_SAMPLE_00018
SSA_West
West
true
false
Female
39
24.2
Low
High
0.259
false
III
3
5.65
Endocrine_only
Basal_like
Negative
Negative
Negative
Intermediate
true
3.832
true
INTEGRATED_SAMPLE_00019
SSA_West
West
true
false
Female
60
30.4
Low
Low
-0.719
false
II
2
2.76
Endocrine_only
Luminal_B
Positive
Positive
Negative
High
false
5.219
false
INTEGRATED_SAMPLE_00020
SSA_West
West
true
false
Female
49
29.9
High
Average
-0.968
false
II
2
1.82
Chemo_only
Luminal_B
Positive
Positive
Negative
Intermediate
false
0.589
true
INTEGRATED_SAMPLE_00021
SSA_West
West
true
false
Female
48
27.6
Low
Average
0.098
false
III
3
6.66
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
Intermediate
true
6.83
true
INTEGRATED_SAMPLE_00022
SSA_West
West
true
false
Female
43
23.6
Middle
Average
-0.091
false
I
2
2.74
Chemo_plus_targeted
Luminal_B
Positive
Positive
Negative
Intermediate
false
5.739
false
INTEGRATED_SAMPLE_00023
SSA_West
West
true
false
Female
63
28.1
Low
Average
0.346
false
III
1
6.81
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
High
true
0.502
true
INTEGRATED_SAMPLE_00024
SSA_West
West
true
false
Female
48
27.2
Low
Average
-0.599
false
IV
1
6.76
Palliative_only
Luminal_A
Positive
Positive
Positive
Low
false
0.207
true
INTEGRATED_SAMPLE_00025
SSA_West
West
true
false
Female
45
20.8
High
High
0.579
false
III
3
6.35
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
Intermediate
true
0.305
true
INTEGRATED_SAMPLE_00026
SSA_West
West
true
false
Female
46
20.1
Low
Average
0.4
true
II
2
5.11
Chemo_only
Luminal_A
Positive
Positive
Negative
High
false
8.463
false
INTEGRATED_SAMPLE_00027
SSA_West
West
true
false
Female
56
30.3
Low
High
1.135
false
III
2
4.83
Chemo_only
Basal_like
Negative
Negative
Negative
High
true
0.034
true
INTEGRATED_SAMPLE_00028
SSA_West
West
true
false
Female
54
14.5
Low
Average
-0.264
false
III
2
6.57
Chemo_only
Basal_like
Negative
Negative
Negative
Intermediate
true
0.207
true
INTEGRATED_SAMPLE_00029
SSA_West
West
true
false
Female
55
28.5
Middle
High
0.336
false
II
2
7.63
Palliative_only
Luminal_B
Positive
Positive
Negative
Intermediate
false
0.861
false
INTEGRATED_SAMPLE_00030
SSA_West
West
true
false
Female
55
25.1
Low
Low
-0.181
false
II
1
6.94
Surgery_only
Luminal_A
Positive
Positive
Negative
High
false
1.596
true
INTEGRATED_SAMPLE_00031
SSA_West
West
true
false
Male
74
34
Low
Average
-1.093
false
III
3
4.48
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
Low
true
2.965
true
INTEGRATED_SAMPLE_00032
SSA_West
West
true
false
Female
46
25
Low
Low
-0.644
false
IV
3
6.57
Palliative_only
Basal_like
Negative
Negative
Negative
High
true
0.008
true
INTEGRATED_SAMPLE_00033
SSA_West
West
true
false
Female
44
30.8
Low
Average
-0.101
false
II
2
4.05
Chemo_plus_targeted
Luminal_B
Positive
Positive
Negative
Intermediate
false
0.016
true
INTEGRATED_SAMPLE_00034
SSA_West
West
true
false
Female
41
25.5
Low
Low
-0.916
false
III
3
6.87
Chemo_only
Luminal_A
Positive
Negative
Negative
Intermediate
false
1.474
true
INTEGRATED_SAMPLE_00035
SSA_West
West
true
false
Female
57
28.1
Middle
Low
-0.592
false
III
2
7.82
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
High
true
0.435
true
INTEGRATED_SAMPLE_00036
SSA_West
West
true
false
Female
62
31.2
Low
Average
0.254
false
IV
3
9.65
Chemo_plus_targeted
HER2_enriched
Positive
Negative
Positive
Intermediate
false
0.611
true
INTEGRATED_SAMPLE_00037
SSA_West
West
true
false
Female
49
25.2
Low
Low
-0.514
false
I
1
3.76
Surgery_only
Basal_like
Negative
Negative
Negative
Intermediate
true
1.637
false
INTEGRATED_SAMPLE_00038
SSA_West
West
true
false
Female
41
32.5
Middle
Average
1.206
false
III
3
6.91
Chemo_only
Luminal_A
Negative
Positive
Positive
Intermediate
false
4.252
true
INTEGRATED_SAMPLE_00039
SSA_West
West
true
false
Female
41
22.5
Middle
High
1.129
false
IV
2
7.53
Palliative_only
Basal_like
Negative
Negative
Negative
Low
true
1.513
true
INTEGRATED_SAMPLE_00040
SSA_West
West
true
false
Female
57
29
Low
Low
-0.682
false
II
1
6.05
Chemo_only
Luminal_B
Positive
Positive
Negative
Intermediate
false
2.07
false
INTEGRATED_SAMPLE_00041
SSA_West
West
true
false
Female
58
32.1
Low
Low
-0.948
false
II
2
6.68
Chemo_only
Luminal_A
Positive
Positive
Negative
Intermediate
false
7.299
false
INTEGRATED_SAMPLE_00042
SSA_West
West
true
false
Female
56
30.8
Low
Low
-0.891
false
I
2
0.89
Chemo_only
HER2_enriched
Negative
Negative
Positive
High
false
1.696
false
INTEGRATED_SAMPLE_00043
SSA_West
West
true
false
Female
43
37.1
High
Average
0.931
false
II
2
3.65
Endocrine_only
HER2_enriched
Positive
Negative
Positive
Low
false
2.014
true
INTEGRATED_SAMPLE_00044
SSA_West
West
true
false
Female
53
23.7
Low
Average
0.182
false
IV
3
9.21
Palliative_only
Luminal_B
Positive
Positive
Positive
Low
false
0.017
true
INTEGRATED_SAMPLE_00045
SSA_West
West
true
false
Female
51
20.6
Low
Low
0.115
false
II
3
3.77
Chemo_only
Basal_like
Negative
Negative
Positive
Low
false
7.648
false
INTEGRATED_SAMPLE_00046
SSA_West
West
true
false
Female
52
22.5
Low
Average
-0.43
false
III
3
4.18
Chemo_plus_targeted
Luminal_A
Positive
Positive
Negative
Low
false
3.62
false
INTEGRATED_SAMPLE_00047
SSA_West
West
true
false
Female
60
30.8
Low
Average
-0.068
false
II
3
5.27
Chemo_only
Luminal_B
Positive
Positive
Negative
Low
false
1.325
true
INTEGRATED_SAMPLE_00048
SSA_West
West
true
false
Female
52
30
Low
Average
-0.171
true
III
3
5.89
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
Intermediate
true
1.912
true
INTEGRATED_SAMPLE_00049
SSA_West
West
true
false
Female
57
28
Low
High
0.757
false
III
3
6.1
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
Low
true
0.411
true
INTEGRATED_SAMPLE_00050
SSA_West
West
true
false
Female
51
21.9
Middle
Average
0.84
false
III
2
7.89
Endocrine_only
Luminal_A
Positive
Positive
Negative
Intermediate
false
3.258
true
INTEGRATED_SAMPLE_00051
SSA_West
West
true
false
Female
53
31.3
Middle
High
1
false
II
2
3.18
Surgery_only
Basal_like
Negative
Negative
Negative
Low
true
6.162
false
INTEGRATED_SAMPLE_00052
SSA_West
West
true
false
Female
57
21.4
Middle
Low
-0.289
false
III
3
7.08
Chemo_only
Basal_like
Positive
Negative
Positive
Intermediate
false
0.513
true
INTEGRATED_SAMPLE_00053
SSA_West
West
true
false
Female
34
33.3
Middle
Average
0.905
false
III
1
0.87
Surgery_only
Basal_like
Negative
Positive
Negative
Intermediate
false
1.805
true
INTEGRATED_SAMPLE_00054
SSA_West
West
true
false
Female
46
41.8
Low
Low
-1.037
false
II
2
3.46
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
Intermediate
true
2.729
false
INTEGRATED_SAMPLE_00055
SSA_West
West
true
false
Female
45
29.3
High
Average
0.006
false
III
3
5.61
Chemo_only
Luminal_A
Positive
Positive
Negative
High
false
1.576
true
INTEGRATED_SAMPLE_00056
SSA_West
West
true
false
Female
43
30.4
Middle
Average
0.852
false
II
2
8.12
Endocrine_only
Luminal_A
Positive
Positive
Negative
Low
false
5.841
true
INTEGRATED_SAMPLE_00057
SSA_West
West
true
false
Female
47
25
Middle
Low
-0.127
false
III
3
4.44
Surgery_only
Basal_like
Negative
Negative
Negative
Intermediate
true
5.01
false
INTEGRATED_SAMPLE_00058
SSA_West
West
true
false
Female
66
18.4
Middle
Average
0.845
false
I
2
0.2
Surgery_only
Basal_like
Negative
Negative
Negative
Intermediate
true
5.576
false
INTEGRATED_SAMPLE_00059
SSA_West
West
true
false
Female
40
24.5
Low
High
0.727
false
I
1
2.49
Surgery_only
Basal_like
Negative
Negative
Negative
Intermediate
true
6.17
false
INTEGRATED_SAMPLE_00060
SSA_West
West
true
false
Female
61
22
Low
Average
0.371
false
I
2
1.88
Surgery_only
Luminal_A
Positive
Positive
Negative
High
false
6.602
false
INTEGRATED_SAMPLE_00061
SSA_West
West
true
false
Female
31
20.3
Low
High
1.612
false
I
1
4.49
Surgery_only
HER2_enriched
Negative
Positive
Positive
Intermediate
false
9.755
false
INTEGRATED_SAMPLE_00062
SSA_West
West
true
false
Female
46
36.1
Low
Average
-0.45
false
III
3
5.06
Palliative_only
Basal_like
Negative
Negative
Negative
High
true
0.019
true
INTEGRATED_SAMPLE_00063
SSA_West
West
true
false
Female
52
28.9
Middle
Average
0.252
false
IV
3
5.46
Palliative_only
Basal_like
Negative
Positive
Negative
Low
false
1.002
true
INTEGRATED_SAMPLE_00064
SSA_West
West
true
false
Female
56
29.4
Low
Low
-0.62
false
IV
3
3.92
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
Intermediate
true
0.262
true
INTEGRATED_SAMPLE_00065
SSA_West
West
true
false
Female
58
26
Low
High
0.978
false
III
2
3.45
Chemo_only
Basal_like
Negative
Negative
Negative
Intermediate
true
0.918
true
INTEGRATED_SAMPLE_00066
SSA_West
West
true
false
Female
59
26.6
High
Low
0.138
false
I
1
4.6
Surgery_only
Luminal_A
Positive
Positive
Positive
Low
false
4.533
false
INTEGRATED_SAMPLE_00067
SSA_West
West
true
false
Female
46
32.3
Middle
Average
-0.043
false
II
2
7.23
Chemo_only
HER2_enriched
Negative
Positive
Positive
Intermediate
false
6.101
true
INTEGRATED_SAMPLE_00068
SSA_West
West
true
false
Female
45
27.3
Middle
Low
-0.166
false
III
3
9.8
Chemo_only
Luminal_B
Positive
Positive
Negative
Intermediate
false
6.287
false
INTEGRATED_SAMPLE_00069
SSA_West
West
true
false
Female
59
30.2
Low
High
-0.228
false
IV
3
7.21
Chemo_plus_targeted
Luminal_A
Positive
Positive
Negative
Intermediate
false
0.094
true
INTEGRATED_SAMPLE_00070
SSA_West
West
true
false
Female
48
26.5
Middle
Average
-0.001
false
II
2
5.6
Endocrine_only
Basal_like
Positive
Negative
Negative
Intermediate
false
0.614
true
INTEGRATED_SAMPLE_00071
SSA_West
West
true
false
Female
36
25.8
High
Average
-0.043
false
III
3
9.15
Endocrine_only
Luminal_A
Positive
Positive
Negative
Intermediate
false
0.984
true
INTEGRATED_SAMPLE_00072
SSA_West
West
true
false
Female
38
20.5
Middle
Average
-1.24
false
II
3
3.63
Surgery_only
Basal_like
Negative
Negative
Negative
High
true
1.448
false
INTEGRATED_SAMPLE_00073
SSA_West
West
true
false
Female
40
17.6
Middle
Average
-0.798
false
IV
3
10.46
Palliative_only
Basal_like
Negative
Negative
Negative
Low
true
0.106
true
INTEGRATED_SAMPLE_00074
SSA_West
West
true
false
Female
55
26.2
Middle
Low
-1.093
false
II
3
5.33
Chemo_only
Luminal_A
Positive
Positive
Negative
Low
false
4.118
false
INTEGRATED_SAMPLE_00075
SSA_West
West
true
false
Female
52
27.8
Low
Low
-1.371
true
III
3
10.91
Chemo_plus_targeted
Luminal_A
Positive
Positive
Negative
Intermediate
false
6.29
true
INTEGRATED_SAMPLE_00076
SSA_West
West
true
false
Female
58
21.1
Middle
Average
-0.243
false
I
2
2.74
Chemo_plus_targeted
Luminal_A
Positive
Positive
Negative
High
false
5.19
false
INTEGRATED_SAMPLE_00077
SSA_West
West
true
false
Female
45
27.3
High
Low
-0.678
false
III
3
7.38
Chemo_plus_targeted
Basal_like
Negative
Negative
Negative
High
true
0.456
true
INTEGRATED_SAMPLE_00078
SSA_West
West
true
false
Female
52
27.8
Low
High
0.588
false
IV
2
6.18
Palliative_only
Luminal_A
Positive
Positive
Negative
High
false
0.026
true
INTEGRATED_SAMPLE_00079
SSA_West
West
true
false
Male
57
16.7
Low
High
1.235
false
I
3
0.8
Surgery_only
Basal_like
Negative
Negative
Negative
Low
true
0.172
true
INTEGRATED_SAMPLE_00080
SSA_West
West
true
false
Female
47
22.9
Low
Average
-0.644
false
IV
3
6.17
Chemo_only
Luminal_B
Positive
Negative
Negative
Low
false
0.777
true
INTEGRATED_SAMPLE_00081
SSA_West
West
true
false
Female
55
29.5
Low
Average
0.11
false
IV
3
5.04
Chemo_plus_targeted
Luminal_A
Positive
Positive
Negative
Low
false
0.974
true
INTEGRATED_SAMPLE_00082
SSA_West
West
true
false
Female
43
29.4
High
Average
0.309
false
II
1
4.98
Chemo_only
HER2_enriched
Positive
Positive
Positive
Intermediate
false
6.322
false
INTEGRATED_SAMPLE_00083
SSA_West
West
true
false
Female
46
21.7
Middle
Average
-1.183
false
III
3
6.74
Surgery_only
Luminal_A
Positive
Positive
Negative
Intermediate
false
1.451
true
INTEGRATED_SAMPLE_00084
SSA_West
West
true
false
Female
46
28.3
Low
Low
-0.932
false
II
3
4.94
Endocrine_only
Basal_like
Negative
Negative
Positive
Low
false
5.371
false
INTEGRATED_SAMPLE_00085
SSA_West
West
true
false
Female
37
32.6
Low
Average
-0.108
false
IV
3
7.86
Palliative_only
Luminal_A
Positive
Negative
Negative
Low
false
0.501
true
INTEGRATED_SAMPLE_00086
SSA_West
West
true
false
Female
55
31.4
Low
Low
-1.226
false
III
3
4.1
Chemo_only
Basal_like
Negative
Negative
Positive
Intermediate
false
2.506
false
INTEGRATED_SAMPLE_00087
SSA_West
West
true
false
Female
45
27
Low
Average
-0.272
false
IV
3
5.9
Palliative_only
Basal_like
Negative
Negative
Negative
Intermediate
true
0.202
true
INTEGRATED_SAMPLE_00088
SSA_West
West
true
false
Female
50
25.2
Middle
Average
-0.835
false
II
3
2.06
Chemo_only
Luminal_B
Positive
Positive
Negative
Low
false
2.431
false
INTEGRATED_SAMPLE_00089
SSA_West
West
true
false
Female
55
24.4
Middle
Average
-0.266
false
III
3
8.16
Chemo_only
Luminal_A
Positive
Positive
Negative
Intermediate
false
5.419
false
INTEGRATED_SAMPLE_00090
SSA_West
West
true
false
Female
55
29.8
Middle
Low
-0.84
false
III
2
3.93
Chemo_only
HER2_enriched
Positive
Positive
Positive
High
false
5.284
true
INTEGRATED_SAMPLE_00091
SSA_West
West
true
false
Female
57
28.5
Low
Average
0.104
false
II
2
5.4
Chemo_plus_targeted
Luminal_A
Positive
Positive
Negative
Low
false
4.315
true
INTEGRATED_SAMPLE_00092
SSA_West
West
true
false
Female
49
30.6
Middle
Low
-1.255
false
I
1
0.2
Palliative_only
HER2_enriched
Negative
Positive
Positive
High
false
2.896
false
INTEGRATED_SAMPLE_00093
SSA_West
West
true
false
Female
45
28.2
Middle
Average
-0.117
false
IV
3
9.49
Palliative_only
Basal_like
Negative
Negative
Positive
Low
false
0.106
true
INTEGRATED_SAMPLE_00094
SSA_West
West
true
false
Female
49
31.6
Low
Average
-0.026
false
III
3
4.77
Endocrine_only
Basal_like
Negative
Negative
Negative
Low
true
1.387
true
INTEGRATED_SAMPLE_00095
SSA_West
West
true
false
Female
31
28
Middle
High
0.134
false
II
3
4.08
Surgery_only
HER2_enriched
Positive
Negative
Positive
Low
false
3.401
true
INTEGRATED_SAMPLE_00096
SSA_West
West
true
false
Female
34
31.4
Middle
Average
-0.319
false
IV
3
8.94
Chemo_only
Basal_like
Negative
Negative
Negative
Intermediate
true
1.02
true
INTEGRATED_SAMPLE_00097
SSA_West
West
true
false
Female
35
31.9
Middle
Average
-0.49
false
II
3
0.52
Chemo_only
Luminal_A
Positive
Positive
Negative
Intermediate
false
6.913
false
INTEGRATED_SAMPLE_00098
SSA_West
West
true
false
Female
39
23.5
Low
Low
-1.161
false
III
3
8.86
Chemo_plus_targeted
Luminal_A
Positive
Positive
Negative
Intermediate
false
0.109
true
INTEGRATED_SAMPLE_00099
SSA_West
West
true
false
Female
54
18.5
Low
Low
-1.041
false
I
2
0.2
Surgery_only
Basal_like
Negative
Negative
Negative
Intermediate
true
2.528
true
INTEGRATED_SAMPLE_00100
SSA_West
West
true
false
Female
40
35.2
Middle
Low
-1.106
false
III
3
3.84
Chemo_only
Basal_like
Negative
Negative
Negative
Intermediate
true
1.841
true