Split (1)

train · 10k rows

sample_id stringlengths 23 23	population stringclasses 7 values	region stringclasses 5 values	is_SSA bool 2 classes	is_reference_panel bool 2 classes	sex stringclasses 2 values	age int64 18 90	diet_pattern stringclasses 3 values	enterotype stringclasses 3 values	shannon_index float64 1.98 5.43	observed_richness int64 43 306	rel_abundance_Bacteroides float64 0 0.76	rel_abundance_Prevotella float64 0 0.78	rel_abundance_Faecalibacterium float64 0.05 0.38	rel_abundance_Ruminococcus float64 0.05 0.49	functional_SCFA_potential float64 1.22 5	functional_Bile_acid_potential float64 0.87 5	functional_Mucin_deg_potential float64 1.26 4.95
MICROBIOME_SAMPLE_00001	SSA_West	West	true	false	Female	53	Mixed_transition	Bacteroides	3.942	188	0.6618	0.0509	0.1251	0.1622	2.887012	3.518768	2.868167
MICROBIOME_SAMPLE_00002	SSA_West	West	true	false	Female	39	Westernized_high_fat_sugar	Prevotella	4.241	187	0.1068	0.5679	0.1498	0.1755	4.334107	2.001164	2.404391
MICROBIOME_SAMPLE_00003	SSA_West	West	true	false	Female	58	High_fiber_plant_rich	Ruminococcus_like	4.278	267	0.1965	0.169	0.2302	0.4043	3.197576	2.397544	3.408904
MICROBIOME_SAMPLE_00004	SSA_West	West	true	false	Female	60	High_fiber_plant_rich	Prevotella	4.102	158	0.0628	0.679	0.1337	0.1246	3.806894	2.042121	3.134634
MICROBIOME_SAMPLE_00005	SSA_West	West	true	false	Female	29	Mixed_transition	Prevotella	4.855	214	0.0804	0.6331	0.1489	0.1376	3.98827	1.991332	3.235568
MICROBIOME_SAMPLE_00006	SSA_West	West	true	false	Female	36	High_fiber_plant_rich	Prevotella	4.466	168	0.1093	0.5817	0.2022	0.1068	4.198045	2.570966	3.349487
MICROBIOME_SAMPLE_00007	SSA_West	West	true	false	Female	51	Westernized_high_fat_sugar	Bacteroides	3.969	182	0.597	0.0846	0.1305	0.1879	2.501568	4.584438	2.497529
MICROBIOME_SAMPLE_00008	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Prevotella	3.451	183	0.094	0.6676	0.136	0.1024	4.257783	2.567795	3.237364
MICROBIOME_SAMPLE_00009	SSA_West	West	true	false	Female	50	High_fiber_plant_rich	Bacteroides	4.314	190	0.6238	0.0737	0.1445	0.158	2.361228	3.541946	2.560842
MICROBIOME_SAMPLE_00010	SSA_West	West	true	false	Female	41	Mixed_transition	Ruminococcus_like	4.876	226	0.1711	0.2112	0.2152	0.4026	3.015799	3.801522	4.199761
MICROBIOME_SAMPLE_00011	SSA_West	West	true	false	Female	60	High_fiber_plant_rich	Bacteroides	3.986	170	0.65	0.0473	0.1742	0.1285	2.670832	4.334145	2.754607
MICROBIOME_SAMPLE_00012	SSA_West	West	true	false	Female	59	High_fiber_plant_rich	Prevotella	3.537	161	0.057	0.6416	0.1489	0.1525	3.989047	2.08476	3.495247
MICROBIOME_SAMPLE_00013	SSA_West	West	true	false	Female	51	Mixed_transition	Prevotella	4.055	210	0.0501	0.6228	0.1687	0.1584	4.06305	2.22595	4.028845
MICROBIOME_SAMPLE_00014	SSA_West	West	true	false	Female	62	Westernized_high_fat_sugar	Ruminococcus_like	4.233	188	0.1857	0.1608	0.2839	0.3695	4.271061	3.428329	3.606353
MICROBIOME_SAMPLE_00015	SSA_West	West	true	false	Female	55	Westernized_high_fat_sugar	Bacteroides	4.248	254	0.6344	0.0772	0.1031	0.1853	2.93927	3.40176	3.174032
MICROBIOME_SAMPLE_00016	SSA_West	West	true	false	Female	41	Mixed_transition	Prevotella	4.148	246	0.0459	0.637	0.1614	0.1556	4.24216	2.7046	2.678111
MICROBIOME_SAMPLE_00017	SSA_West	West	true	false	Female	54	Mixed_transition	Prevotella	4.002	237	0.0512	0.6255	0.1172	0.2061	4.923462	2.355904	3.107943
MICROBIOME_SAMPLE_00018	SSA_West	West	true	false	Female	39	Mixed_transition	Prevotella	3.961	194	0.0731	0.6233	0.1564	0.1473	4.12488	2.368993	2.755864
MICROBIOME_SAMPLE_00019	SSA_West	West	true	false	Female	60	High_fiber_plant_rich	Prevotella	4.658	207	0.0648	0.6504	0.085	0.1999	4.109752	3.273782	2.552262
MICROBIOME_SAMPLE_00020	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Bacteroides	4.245	202	0.6542	0.0607	0.1139	0.1712	2.086963	3.249197	2.447747
MICROBIOME_SAMPLE_00021	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Prevotella	4.492	240	0.0848	0.6146	0.2017	0.0988	3.834708	2.265928	3.257423
MICROBIOME_SAMPLE_00022	SSA_West	West	true	false	Female	43	Mixed_transition	Ruminococcus_like	4.332	218	0.1912	0.2157	0.2458	0.3474	2.90538	2.614082	4.105932
MICROBIOME_SAMPLE_00023	SSA_West	West	true	false	Female	63	High_fiber_plant_rich	Prevotella	4.312	231	0.0251	0.6967	0.1472	0.1311	3.899673	2.814708	3.192496
MICROBIOME_SAMPLE_00024	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Ruminococcus_like	3.673	216	0.1273	0.1669	0.3481	0.3577	3.4969	2.575586	2.909079
MICROBIOME_SAMPLE_00025	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Bacteroides	4.569	195	0.6696	0.0576	0.1532	0.1196	3.052832	4.016205	2.255524
MICROBIOME_SAMPLE_00026	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Prevotella	4.641	144	0.058	0.6641	0.1341	0.1437	4.450773	1.907135	2.564121
MICROBIOME_SAMPLE_00027	SSA_West	West	true	false	Female	56	High_fiber_plant_rich	Prevotella	4.548	219	0.0668	0.6445	0.1344	0.1542	4.404816	3.118728	2.91747
MICROBIOME_SAMPLE_00028	SSA_West	West	true	false	Female	54	Mixed_transition	Bacteroides	4.689	174	0.64	0.1287	0.1165	0.1148	2.532682	3.840976	2.176019
MICROBIOME_SAMPLE_00029	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Prevotella	3.908	261	0.0871	0.7025	0.1054	0.1051	4.184025	3.141943	2.496026
MICROBIOME_SAMPLE_00030	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Prevotella	3.813	197	0.0669	0.7068	0.1225	0.1038	4.190634	2.639032	3.137021
MICROBIOME_SAMPLE_00031	SSA_West	West	true	false	Female	74	High_fiber_plant_rich	Prevotella	4.383	190	0.0651	0.6069	0.1442	0.1838	4.455143	2.297516	3.115449
MICROBIOME_SAMPLE_00032	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Bacteroides	3.768	214	0.5995	0.0504	0.2068	0.1433	2.30015	3.481818	3.545982
MICROBIOME_SAMPLE_00033	SSA_West	West	true	false	Female	44	Mixed_transition	Prevotella	4.019	205	0.0692	0.6349	0.1882	0.1076	4.257852	2.370841	2.700382
MICROBIOME_SAMPLE_00034	SSA_West	West	true	false	Female	41	Westernized_high_fat_sugar	Prevotella	3.153	198	0.07	0.627	0.0975	0.2055	4.185206	2.407858	3.778098
MICROBIOME_SAMPLE_00035	SSA_West	West	true	false	Female	57	High_fiber_plant_rich	Prevotella	3.628	147	0.0874	0.6428	0.1753	0.0945	4.281439	2.795707	3.274469
MICROBIOME_SAMPLE_00036	SSA_West	West	true	false	Female	62	High_fiber_plant_rich	Prevotella	3.79	180	0.0449	0.6697	0.1466	0.1389	3.696483	1.880161	3.684438
MICROBIOME_SAMPLE_00037	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Prevotella	3.396	238	0.0759	0.6274	0.1298	0.1669	2.818762	2.070323	2.852366
MICROBIOME_SAMPLE_00038	SSA_West	West	true	false	Female	41	High_fiber_plant_rich	Prevotella	3.965	225	0.1214	0.6523	0.1218	0.1046	4.298168	3.05801	3.118385
MICROBIOME_SAMPLE_00039	SSA_West	West	true	false	Female	41	Mixed_transition	Ruminococcus_like	4.435	151	0.1674	0.2111	0.2403	0.3813	3.173225	3.133739	3.259704
MICROBIOME_SAMPLE_00040	SSA_West	West	true	false	Female	57	Westernized_high_fat_sugar	Prevotella	3.457	175	0.0377	0.658	0.1252	0.179	4.40936	2.624118	2.39294
MICROBIOME_SAMPLE_00041	SSA_West	West	true	false	Female	58	High_fiber_plant_rich	Ruminococcus_like	4.041	213	0.1966	0.1795	0.2873	0.3366	3.106576	3.349464	3.76259
MICROBIOME_SAMPLE_00042	SSA_West	West	true	false	Female	56	Westernized_high_fat_sugar	Ruminococcus_like	3.982	120	0.2139	0.1457	0.3077	0.3328	2.912133	2.82656	3.88069
MICROBIOME_SAMPLE_00043	SSA_West	West	true	false	Female	43	High_fiber_plant_rich	Prevotella	4.246	182	0.0878	0.5736	0.1391	0.1994	3.904288	2.474692	2.235584
MICROBIOME_SAMPLE_00044	SSA_West	West	true	false	Female	53	High_fiber_plant_rich	Bacteroides	3.968	212	0.6509	0.0377	0.1917	0.1197	2.294031	3.891794	3.226809
MICROBIOME_SAMPLE_00045	SSA_West	West	true	false	Female	51	Mixed_transition	Prevotella	4.162	213	0.0966	0.5796	0.1577	0.1661	4.713584	2.600769	2.962975
MICROBIOME_SAMPLE_00046	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Ruminococcus_like	3.989	194	0.1856	0.2124	0.2294	0.3726	3.997908	3.39824	3.646476
MICROBIOME_SAMPLE_00047	SSA_West	West	true	false	Female	60	Mixed_transition	Prevotella	3.398	206	0.0016	0.6979	0.1572	0.1433	4.868553	3.129737	3.313125
MICROBIOME_SAMPLE_00048	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Bacteroides	4.348	157	0.6064	0.1047	0.1332	0.1556	2.726591	3.359658	2.491963
MICROBIOME_SAMPLE_00049	SSA_West	West	true	false	Female	57	High_fiber_plant_rich	Prevotella	3.737	200	0.0358	0.6891	0.1231	0.1519	4.072153	2.545902	2.191106
MICROBIOME_SAMPLE_00050	SSA_West	West	true	false	Female	51	High_fiber_plant_rich	Prevotella	4.314	181	0.0699	0.6285	0.1943	0.1074	3.840106	2.443039	2.799456
MICROBIOME_SAMPLE_00051	SSA_West	West	true	false	Female	53	High_fiber_plant_rich	Ruminococcus_like	3.823	156	0.2227	0.2423	0.2484	0.2866	3.495218	2.607569	3.180332
MICROBIOME_SAMPLE_00052	SSA_West	West	true	false	Female	57	Westernized_high_fat_sugar	Bacteroides	3.958	144	0.5864	0.107	0.1509	0.1557	1.707101	4.179113	2.325792
MICROBIOME_SAMPLE_00053	SSA_West	West	true	false	Female	34	High_fiber_plant_rich	Prevotella	3.875	131	0.115	0.5731	0.1442	0.1677	4.089635	2.94096	2.70857
MICROBIOME_SAMPLE_00054	SSA_West	West	true	false	Female	46	Mixed_transition	Prevotella	3.898	193	0.0388	0.7188	0.1476	0.0948	3.816935	2.261978	3.241135
MICROBIOME_SAMPLE_00055	SSA_West	West	true	false	Female	45	Mixed_transition	Prevotella	4.308	171	0.0695	0.6304	0.1562	0.144	3.748576	2.40344	3.084472
MICROBIOME_SAMPLE_00056	SSA_West	West	true	false	Female	43	High_fiber_plant_rich	Bacteroides	3.469	229	0.592	0.1191	0.112	0.1769	2.974312	3.727107	2.449343
MICROBIOME_SAMPLE_00057	SSA_West	West	true	false	Female	47	Westernized_high_fat_sugar	Prevotella	3.8	146	0.1148	0.5885	0.1443	0.1524	4.143	2.578115	3.27856
MICROBIOME_SAMPLE_00058	SSA_West	West	true	false	Female	66	Mixed_transition	Bacteroides	3.983	236	0.6918	0.0409	0.0929	0.1743	3.028149	4.582791	2.895156
MICROBIOME_SAMPLE_00059	SSA_West	West	true	false	Female	40	Mixed_transition	Prevotella	4.686	221	0.0359	0.6633	0.1563	0.1445	3.984758	3.026891	2.597267
MICROBIOME_SAMPLE_00060	SSA_West	West	true	false	Female	61	High_fiber_plant_rich	Bacteroides	3.757	152	0.602	0.0982	0.1624	0.1373	1.849558	3.973084	2.530509
MICROBIOME_SAMPLE_00061	SSA_West	West	true	false	Female	31	High_fiber_plant_rich	Ruminococcus_like	4.005	206	0.1732	0.1413	0.2759	0.4096	3.216107	3.027369	3.269732
MICROBIOME_SAMPLE_00062	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Prevotella	3.435	231	0.0819	0.6242	0.1464	0.1476	3.706181	2.269895	2.710317
MICROBIOME_SAMPLE_00063	SSA_West	West	true	false	Male	52	Westernized_high_fat_sugar	Prevotella	4.167	238	0.108	0.61	0.138	0.144	4.244611	2.310403	2.860588
MICROBIOME_SAMPLE_00064	SSA_West	West	true	false	Female	56	High_fiber_plant_rich	Bacteroides	3.523	175	0.5996	0.0486	0.1756	0.1762	2.474723	4.249594	3.141617
MICROBIOME_SAMPLE_00065	SSA_West	West	true	false	Female	58	Mixed_transition	Prevotella	3.919	212	0.0367	0.6836	0.1727	0.1069	3.684393	2.5685	2.7647
MICROBIOME_SAMPLE_00066	SSA_West	West	true	false	Female	59	Westernized_high_fat_sugar	Prevotella	4.71	190	0.1269	0.596	0.0942	0.1828	4.439472	2.552059	3.158653
MICROBIOME_SAMPLE_00067	SSA_West	West	true	false	Female	46	Mixed_transition	Ruminococcus_like	4.083	238	0.1744	0.2168	0.285	0.3238	3.673503	3.609038	3.367927
MICROBIOME_SAMPLE_00068	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Ruminococcus_like	3.135	200	0.1996	0.1795	0.2737	0.3473	2.401191	3.665038	3.252868
MICROBIOME_SAMPLE_00069	SSA_West	West	true	false	Female	59	Mixed_transition	Prevotella	4.491	200	0.0913	0.5958	0.1373	0.1757	3.729143	2.000667	2.931442
MICROBIOME_SAMPLE_00070	SSA_West	West	true	false	Female	48	Mixed_transition	Prevotella	3.549	101	0.1068	0.6683	0.137	0.0879	4.409165	2.540135	3.024078
MICROBIOME_SAMPLE_00071	SSA_West	West	true	false	Female	36	Mixed_transition	Prevotella	4.221	118	0.0465	0.6775	0.1306	0.1453	4.09848	2.802575	2.307918
MICROBIOME_SAMPLE_00072	SSA_West	West	true	false	Female	38	Mixed_transition	Bacteroides	3.73	183	0.6065	0.0744	0.1681	0.151	2.475255	3.330916	2.698867
MICROBIOME_SAMPLE_00073	SSA_West	West	true	false	Female	40	High_fiber_plant_rich	Bacteroides	4.333	234	0.6746	0.0618	0.1477	0.1158	3.401793	3.620446	2.256618
MICROBIOME_SAMPLE_00074	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Ruminococcus_like	3.822	240	0.1491	0.1376	0.3201	0.3932	3.110822	3.223854	3.454685
MICROBIOME_SAMPLE_00075	SSA_West	West	true	false	Female	52	Mixed_transition	Bacteroides	3.433	165	0.6425	0.0941	0.1087	0.1547	2.53077	3.784138	2.759586
MICROBIOME_SAMPLE_00076	SSA_West	West	true	false	Female	58	Mixed_transition	Prevotella	4.598	179	0.109	0.617	0.1387	0.1353	4.092487	2.232061	2.938454
MICROBIOME_SAMPLE_00077	SSA_West	West	true	false	Female	45	Mixed_transition	Prevotella	4.522	143	0.0385	0.6625	0.1683	0.1307	3.720966	2.957537	3.174351
MICROBIOME_SAMPLE_00078	SSA_West	West	true	false	Female	52	Mixed_transition	Bacteroides	3.892	223	0.6535	0.0626	0.1353	0.1486	2.950033	3.196134	2.851621
MICROBIOME_SAMPLE_00079	SSA_West	West	true	false	Female	57	High_fiber_plant_rich	Prevotella	4.042	182	0.0632	0.6299	0.1265	0.1805	4.01002	2.349621	2.642139
MICROBIOME_SAMPLE_00080	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Ruminococcus_like	4.406	164	0.1126	0.2069	0.2954	0.3851	3.564622	1.906592	4.030498
MICROBIOME_SAMPLE_00081	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Ruminococcus_like	3.92	208	0.1983	0.1565	0.2109	0.4343	3.58245	3.062741	3.47031
MICROBIOME_SAMPLE_00082	SSA_West	West	true	false	Female	43	Westernized_high_fat_sugar	Ruminococcus_like	3.265	178	0.1757	0.1871	0.3198	0.3174	2.660343	2.727302	3.461738
MICROBIOME_SAMPLE_00083	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Bacteroides	3.985	219	0.6214	0.0913	0.1493	0.138	2.17384	3.347363	2.738833
MICROBIOME_SAMPLE_00084	SSA_West	West	true	false	Female	46	Mixed_transition	Bacteroides	4.366	183	0.6134	0.0718	0.1871	0.1278	2.683711	3.77783	2.295676
MICROBIOME_SAMPLE_00085	SSA_West	West	true	false	Female	37	High_fiber_plant_rich	Prevotella	4.144	142	0.0977	0.6128	0.1211	0.1685	3.58726	2.100927	2.168301
MICROBIOME_SAMPLE_00086	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Bacteroides	3.431	161	0.629	0.0622	0.1557	0.153	2.763021	3.415614	2.677064
MICROBIOME_SAMPLE_00087	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Prevotella	3.405	176	0.0544	0.6616	0.1394	0.1446	3.991019	1.548356	2.101221
MICROBIOME_SAMPLE_00088	SSA_West	West	true	false	Male	50	Mixed_transition	Prevotella	4.006	160	0.0629	0.617	0.1608	0.1593	3.778634	2.38003	3.01048
MICROBIOME_SAMPLE_00089	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Prevotella	4.089	231	0.0429	0.7003	0.0917	0.165	4.25901	1.377846	2.975315
MICROBIOME_SAMPLE_00090	SSA_West	West	true	false	Female	55	Westernized_high_fat_sugar	Bacteroides	3.622	217	0.5999	0.0927	0.1461	0.1613	3.043694	3.718391	2.713642
MICROBIOME_SAMPLE_00091	SSA_West	West	true	false	Female	57	High_fiber_plant_rich	Prevotella	3.65	214	0.109	0.6591	0.1583	0.0736	3.745667	2.16616	2.917947
MICROBIOME_SAMPLE_00092	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Bacteroides	3.668	268	0.5923	0.0523	0.1765	0.1789	2.859979	3.492218	2.800811
MICROBIOME_SAMPLE_00093	SSA_West	West	true	false	Female	45	Mixed_transition	Prevotella	4.062	161	0.1034	0.6377	0.139	0.1199	4.415044	2.133549	3.356804
MICROBIOME_SAMPLE_00094	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Prevotella	4.112	173	0.0871	0.6377	0.131	0.1443	3.367114	2.369661	3.159845
MICROBIOME_SAMPLE_00095	SSA_West	West	true	false	Female	31	Mixed_transition	Prevotella	3.949	174	0.0387	0.6186	0.195	0.1477	3.765786	1.997543	2.260588
MICROBIOME_SAMPLE_00096	SSA_West	West	true	false	Female	34	High_fiber_plant_rich	Ruminococcus_like	3.929	156	0.1561	0.2124	0.279	0.3525	3.076645	3.882353	3.887849
MICROBIOME_SAMPLE_00097	SSA_West	West	true	false	Female	35	High_fiber_plant_rich	Prevotella	4.04	167	0.0844	0.6534	0.1477	0.1145	3.735595	2.648228	3.188029
MICROBIOME_SAMPLE_00098	SSA_West	West	true	false	Female	39	Mixed_transition	Prevotella	4.12	199	0.0885	0.6368	0.1383	0.1363	3.965081	2.087868	2.582789
MICROBIOME_SAMPLE_00099	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Ruminococcus_like	4.426	188	0.1985	0.1922	0.2845	0.3248	3.36356	3.295155	2.779469
MICROBIOME_SAMPLE_00100	SSA_West	West	true	false	Female	40	High_fiber_plant_rich	Prevotella	4.479	218	0.0855	0.614	0.1354	0.1651	3.610713	1.975713	2.741068

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